Publications
* peer reviewed publications

Albin, A., Taftazani, A., Herdt, D., Schlachter, K., Brunner, J., Senz, M., Rädle, M., Bader, J. (2016) Lokalisation und Desinfektion von mikrobiologischen Kontaminationen in Rohrleitungssystemen durch ein In-Line Mess- und Reinigungssystem. BioprocessingDays, 22-24.02.2016, Recklinghausen, Germany
* Riedel, S., Jahns, S., Koenig, S., Bock, M.C.E., Brigham, C.J., Bader, J., Stahl, U. (2015) Polyhydroxyalkanoates production with Ralstonia eutropha from low quality waste animal fats. Journal of Biotechnology 214 (2015) 119–127
Subramaniam, R., Esser, M., Popovic, M., Bader, J., Chistoserdov, A., Bajpai, R. (2015) Effect of C/N Ratio on Enzymatic Activity for Microbial Lipid Production. Conference Proceedings of 2015 AIChE Annual Meeting (ISBN:978-0-8169-1094-6), Sustainable Engineering Forum, (372) Reaction Kinetics and Transport Fundamentals for Biomass Conversion I, presentation 372a, November 8-13, 2015, Salt Lake City, USA
Albin, A., Rabe, A., Bader, J. (2015) Qualitätssicherung in der Pharma- und Lebensmittelindustrie: Detektion und Entfernung von Biofilmen in Rohrleitungssystemen. Accepted for Research Day of Beuth University
* Bader, J., Brigham, C., Popovic, M.K. (2015) Influence of CO2 on microbial fermentation processes. in Biotechnology, [Eds.Horst W.Doelle, Stefan Rokem, Marin Berovic], in Encyclopedia of Life Support Systems (EOLSS), Developed under the Auspices ofthe UNESCO, Eolss Publishers, Paris, France, [http://www.eolss.net]
* Senz, M., van Lengerich, B., Bader, J., Stahl, U. (2015) Control of Cell Morphology of Probiotic Lactobacillus acidophilus for Enhanced Cell Stability during Industrial Processing. International Journal of Food Microbiology, 192 (2): 34–42
Albin, A., Stahl, U. Bader, J. (2014) Validierung von Sterilisationsprozessen. Brauwelt 45: 1366-1370
Lorenz, E., Runge, D., Schmidt, L., Stahl U., Bader J. (2014) Process Development for Rhodotorula glutinis: From shake flasks to pilot scale. 3rd BioProScale Symposium "Inhomogeneities in large-scale bioprocesses: System biology and process dynamics" www.biotechnologie.ifgb.de/seminars-conventions/index.html
Dounia, S., Schütze, O., Angersbach, A., Bunin. V., Stahl, U., Bader, J. (2014) Monitoring of Bacillus Sporulation via Electo-optical Measuring Method (EloTrace®) 3rd BioProScale Symposium "Inhomogeneities in large-scale bioprocesses: System biology and process dynamics" www.biotechnologie.ifgb.de/seminars-conventions/index.html
Dounia, S., Skelac, L., Ziegler, A., Kron, A., Rädle, M., Stahl, U., Bader, J. (2014) Entwicklung eines Querstromfiltrationsmoduls zur Kopplung von Bioreaktoren an eine UHPLC. DECHEMA Infotag Membrantechnik "Neuentwicklungen Cross Flow Filtration - Membranen, Module und Prozesse" www.processnet.org/MEM2014-proc_page-5506.html
* Hageböck, M., Stahl, U., Bader, J. (2014) Stability of creatine derivatives during simulated digestion in an in vitro model. Food & Function 5: 359-363
* Popović, M.K., Senz, M., Bader, J., Skelac, L., Schilf, W., Bajpai, R. (2014) Positive effect of reduced aeration rate on secretion of alpha-amylase and neutral proteases during pressurized fermentation of thermophilic Bacillus caldolyticus. New Biotechnology 31 (2): 141-149
Hageböck, M., Stahl, U., Bader, J. (2013) Bioaccessibility of creatine derivates during simulated digestion . Bayern Innovativ – Funktionelle Inhaltsstoffe: Food, Kosmetik, Pharma 22.10.2013 Bayreuth
Schütt, D., Hageböck, M., Bader, J., Stahl U., Garbe, LA. (2013) Verhalten und Analytik von Anthocyanen im simulierten in-vitro Verdauungsmodell, Deutsche Lebensmittelrundschau, Sonderthema: Analytik pflanzlicher Lebensmittel, Vol. 109: 40-47
* Riedel, S.L., Brigham, C.J., Budde, C.F., Bader, J., Rha, C. K., Stahl, U., Sinskey, A.J. (2013) Recovery of Poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) from Ralstonia eutropha cultures with non-halogenated solvents. Biotechnology and Bioengineering 110 (2): 461-470. doi: 10.1002/bit.24713
* Bader, J., Albin, A., Stahl, U. (2012) Spore-forming Bacteria and Their Utilization as Probiotics. Beneficial Microbes 1;3 (1): 67-75
* Bader, J., Skelac, L., Wewetzer, S., Senz, M., Popović, M.K., Bajpai, R. (2012) Effect of CO2 partial pressure on the production of thermostable alpha-amylase and neutral protease by Bacillus caldolyticus. Applied Biochemistry and Microbiology, 48, (2): 182-187
Schütt, D., Hageböck, M., Bader, J., Stahl, U., Garbe, L.A. (2012) Following the metabolism of polyphenols and proanthocyanins in an in-vitro digestion model New Biotechnology 29, S125-S126
Riedel, S.L., Brigham, C., Bader, J., Koenig, S., Rha, C.K., Stahl, S., Sinskey, A.J. (2012) Polyhydroxyalkanoates production with Ralstonia eutropha from plant and animal oils and their recovery. New Biotechnology 29, S69
Lorenz, E., Neumann, K., Stahl, U., Bader, J. (2012) DoE based screening system for development of upscalable bioreactor cultivation for glutathione-enriched yeasts.. New Biotechnology 29, S77
Albin, A., Dounia, S., Stahl, U., Bader, J. (2012) Comparable and Reproducible Validation of Sterilization Processes with Endospores of Bacillus subtilis. New Biotechnology 29, S234
Hageböck, M., Schütt, D., Popović, M.K., Stahl, U., Garbe, L.A., Bader, J. (2012) Identification of metabolization of orally consumed products in a simulated digestion model. New Biotechnology 29, S184
Senz, M., van Lengerich, B., Stahl, U., Bader, J. (2012) Control of Cell Morphology of Lactobacillus acidophilus for Enhanced Cell Stability during Freeze-drying and Storage. New Biotechnology 29, S208
Menschel, S., Bader, J., Popović, M.K. (2012) Comparative study of heat induced fusion protein fermentation in stirred tank, bubble column and air-lift bioreactors. 9th EUROPEAN Symposium on Biochemical Engineering Science, Istanbul,Turkey
Gierds, J.H., Baki, I., Quandt, C., Pollmann, E., Bader, J., Folz, R., Harms, D. (2012) Identification of yeast by MALDI–TOF MS. World Brewing Congress, Portland, Oregon, USA
Dounia, S., Angersbach, A., Bunin. V., Bader, J., Stahl, U. (2012) Online Monitoring using EloTrace Measurements for Optimization of Bacterial Fermentations. Bioproscale, Berlin Germany
Riedel, S.L., S. Koenig, Bader, J., Brigham, C.J., Rha, C.K., Sinskey, A.J., Stahl, U. (2012) PHA Production with Ralstonia eutropha from (Waste) Fats. ACHEMA 2012 30th World Exhibition Congress. Frankfurt, Germany
* Riedel, S.L., Bader, J., Brigham, C.J., Budde, C.F., Yusof, Z.A.M., Rha, C.K., Sinskey, A.J. (2012) Production of Poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) by Ralstonia eutropha in high cell density palm oil fermentations. Biotechnology and Bioengineering. 109 (1): 74-83
* Bader, J., Popović, M.K., Stahl, U. (2012) Processing, consumption and effects of probiotic microorganisms. in Biotechnology, [Eds. Doelle, H.W., Rokem, S., Berovic, M.], in Encyclopedia of Life Support Systems(EOLSS), Developed under the Auspices of the UNESCO, Eolss Publishers, Oxford, UK, [http://www.eolss.net]
Baki, I., Stahl, U., Bader, J. (2011) Co-Kultivierungen in der Getränkeherstellung. Brauwelt 36: 1098-1101
Ziegler, A., Kron, A., Dounia, S., Sturm, D., Bader, J., Rädle, M., Stahl, U. (2011) Der selbstoptimierende Fermenter basierend auf HPLC Technologie. 10. Dresdner Sensor-Symposium. Dresden, Germany. ISBN 978-3-942710-53-4
Baki, I., Schütt, D., Bader, J., Mast-Gerlach, E., Garbe, L.A., Stahl, U. (2011) Functional, fermented beverages based on malted cereals and fruit components. Current Opinion in Biotechnology, Volume 22, Supplement 1: S98
Schütt, D., Hageböck, M., Bader, J., Mast-Gerlach, E., Stahl, U., Garbe, L.A. (2011) Microbial metabolism of secondary plant metabolites by a simulated digestion model. Current Opinion in Biotechnology, Volume 22, Supplement 1: S97
Meincke, S., Albin, A., Hageböck, M., Hoppe, L., Bader, J., Mast-Gerlach, E., Garbe, L.A., Stahl, U. (2011) Production and application of spores of Bacillus subtilis with a high and reproducible resistance against environmental conditions. European Congress of Applied Biotechnology. September 25 - 29, 2011, Berlin, Germany
Dounia, S., Ziegler, A., Stumpf, M., Sturm, D., Bader, J., Rädle, M., Stahl, U. (2011) A self optimizing bioreactor based on HPLC-Technology. European Congress of Applied Biotechnology. September 25 - 29, 2011, Berlin, Germany
Baki, I., Schütt, D., Bader, J., Mast-Gerlach, E., Garbe, L.A., Rath, F., Stahl, U. (2011) Controlled coculture fermentation for the production of a functional fermented beverage based on renewable resources. European Congress of Applied Biotechnology. September 25 - 29, 2011, Berlin, Germany
Riedel, S., Brigham, C., Bader, J., Neal, M., Budde, C., Chachra, D., Rha, C.K., Sinskey, A.J. (2011) High cell density fermentation of recombinant Ralstonia eutropha and recovery of polyhydroxyalkanoates. European Congress of Applied Biotechnology. September 25 - 29, 2011, Berlin, Germany
Castritius, S., Senz, S., Bader, J., Harms, D., Stahl, U. (2011) Determination of morphologic differences of Lactobacillus acidophilus using FTIR-Spectroscopy and chemometric model. European Congress of Applied Biotechnology. September 25 - 29, 2011, Berlin, Germany
Senz, M., Mast-Gerlach, E., Bader, J., Stahl, U. (2011) Influence of the fermentation medium on the stability properties of Lactobacillus preparations during processing. International Scientific Conference Probiotics and Prebiotics. 14th - 16th Juni 2011, Kosice, Slovakia
Hageböck, M., Schütt, D., Bader, J., Mast-Gerlach, E., Garbe, L. A., Stahl, U. (2011) A simulated digestion model for metabolization of functional food ingredients. International Scientific Conference Probiotics and Prebiotics. 14th - 16th Juni 2011, Kosice, Slovakia
Hageböck, M., Bader, J., Mast-Gerlach, E., Stahl, U. (2011) Metabolization of functional food ingredients in a simulated digestion model. Internationaler Kongress Forum Life Science 2011, 23./24. März 2011, Technische Universität München – Garching
Baki, I., Bader, J., Mast-Gerlach, E., Rath, F., Stahl, U. (2011) Development of functional beverages based on natural renewable resources. Internationaler Kongress Forum Life Science 2011, 23./24. März 2011, Technische Universität München – Garching
Baki, I., Bader, J., Mast-Gerlach, E., Rath, F., Stahl, U. (2010) Innovative fermented beverages based on malted cereals and the addition of fruits. 2.-5. Mai 2010, 16th IFU congress in Istanbul, Turkey
Skelac, L., Wewetzer, S., Bader, J., Popović, M.K. (2010) Batch and chemostat cultivation for production of thermostable hydrolases: protease and alpha-amylase. 8th European Symposium on Biochemical Engineering Science, 5. - 8. September 2010 in Bologna, Italien
* Bader, J., Mast-Gerlach, E., Popovic, M.K., Bajpai, R., Stahl, U. (2009) Relevance of coculture fermentations in biotechnology. Journal of Applied Microbiology 109 (2): 371-387
Bader, J., Castritius, S., Harms, D., Kron, A., Schäfer, T., Rädle, M., Stahl, U. (2009) New developments in online-fermentation-control using MIR-Sensors. Inhomogenities in large-scale bioreactors, 24-27 November 2009, Berlin, Germany
Skelac, L., Wewetzer, S., Bader, J., Karschöldgen, A., Popović, M.K. (2009) Reliability of optical dissolved CO2 measurements in fermentation medium during the production of thermostable alpha-amylase and protease by B. caldolyticus. Inhomogenities in large-scale bioreactors, 24-27 November 2009, Berlin, Germany
Popovic, M.K., Senz, M., Bader, J. (2009) Effect of an elevated carbon dioxide partial pressure on the production of thermostable alpha-amylase and protease from Bacillus caldolyticus. New Biotechnology, 25S1: 193
Bader, J., Brokamp, C., Popović, M.K. (2009) Feeding strategies for fermentation of thermostable alpha-amylase: A comparison. Book of Abstracts, 29th International Exhibition- Congress on Chemical Engineering, ACHEMA, DECHEMA e.V.
Baki, I., Bader, J., Mast-Gerlach, E., Rath, F., Stahl, U. (2009) Neuartig fermentierte Getränke auf Getreidebasis. 17th International Conference of IGV GmbH „Grains are functional"
Stahl, U., Bader, J. (2009) Vom Fermentationsprozess zum funktionellen Lebensmittel. 96. Brau- und maschinentechnische Arbeitstagung der VLB
Bader; J. (2008) Prozesstechnische Steuerung von Mischkulturen zur Erzeugung von Gärgetränken. [Dissertation] Berlin, Technische Universität Berlin
* Bader, J., Schwab, K., Popović, M.K., Bajpai, R., Neumann, B. (2007) Application of pH and pO2 probes during Bacillus caldolyticus fermentation: An additional approach for improving a feeding strategy. Chemical and Biochemical Engineering Quarterly 12 (4): 315-320
Bader, J., Wiese, S., Mast-Gerlach, E., Stahl, U. (2007) Neuartige Getränke aus dem Bioreaktor. GIT Labor-Fachzeitschrift 9: 710-712
Bader, J., Mast-Gerlach, E., Stahl, U. (2007) Controlled coculture fermentation for the production of new beverages. BrewingScience Sept./Oct. 128-134
Bader, J., Mast-Gerlach, Grebe, A., E., Stahl, U. (2007) Development of a controlled coculture fermentation process of Lactobacillus ssp. and Gluconobacter ssp. LabCiencia con Noticias técnicas 3: 19-20
Albin, A., Bader, J., Mast-Gerlach, E., Stahl, U. (2007) Improving fermentation and biomass formation of Gluconobacter oxydans. Journal of Biotechnology 131S: 160
* Bader, J., Neumann, B., Schwab, K., Popović, M.K., Scheler, C., Bajpai, R. (2006) α-Amylase Production in Fed Batch Cultivation of Bacillus caldolyticus: An nterpretation of Fermentation Course Using 2-D Gel Electrophoresis. Chemical and Biochemical Engineering Quarterly 20 (4): 413–420
Bader, J., Neumann, B., Schwab, K., Popović, M.K., Bajpai, R. (2005) Application of pH and pO2 probes during Bacillus caldolyticus fermentation: An additional approach in improving a feeding strategy. Journal of Biotechnology 118S1: 62
Bader, J., Neumann, B., Schwab, K., Popović, M.K., Scheler, C., Bajpai, R. (2005) Preliminary investigation: Development of a two component feeding strategy with the help of proteome analysis. Journal of Biotechnology 118S1: 27
* Bader, J., Neumann, B., Schwab, K., Popović, M.K., Scheler, C., Bajpai, R. (2005) α-amylase production in fed-batch cultivation of Bacillus caldolyticus. Chemie Ingenieur Technik 77 (8): 1199-1200